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Table 4 RMSD values of the important domains of Asaia sp. RNase III in comparison to the Aquifex aeolicus RNase III

From: Molecular characterization of RNase III protein of Asaia sp. for developing a robust RNAi-based paratransgensis tool to affect the sexual life-cycle of Plasmodium or Anopheles fitness

Signature motif          
Amino acidERLEFIGDRL
Position57585960616263646566
RSMD0.322 Å0.296 Å0.166 Å0.276 Å0.420 Å0.297 Å0.325 Å0.260 Å0.118 Å0.136 Å
RBM 1
Amino acidPKTTLQEFVL
Position173174175176177178179180181182
RSMD0.292 Å0.133 Å0.262 Å0.194 Å0.174 Å0.204 Å0.200 Å0.060 Å0.204 Å0.155 Å
Amino acidARG       
Position183184185
RSMD0.200 Å0.269 Å0.700 Å
RBM 2
Amino acidGPSHAEGALG
Position1981992002012028485868788
RSMD0.376 Å0.526 Å0.273 Å0.532 Å0.545 Å0.151 Å0.263 Å0.163 Å0.245 Å0.151 Å
RBM 3
Amino acidEGALG     
Position8485868788     
RSMD0.151 Å0.263 Å0.163 Å0.245 Å0.151 Å     
RBM 4
Amino acidALHIAEHEEQ
Position112113114115116117118119120121
RSMD0.293 Å0.373 Å0.468 Å0.823 Å0.519 Å0.528 Å0.736 Å0.636 Å2.201 Å
Amino acidAGIRSLA 
Position122123124125126127128
RMSD1.678 Å0.528 Å