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Table 5 Cross-amplifications at 16 polymorphic loci in Trichinella spp.

From: Development of genome-wide polymorphic microsatellite markers for Trichinella spiralis

Locus/taxaT. spiralis
ISS4
T. nativa
ISS70
T. britovi
ISS100
T. pseudospiralis
ISS13
T. murrelli
ISS415
Trichinella T6
ISS34
NaSize (bp)NaSize (bp)NaSize (bp)NaSize (bp)NaSize (bp)NaSize (bp)
TsMs012267–2792265–2782271–2812286–2963265–281
TsMs02115911673167–174117011782165–174
TsMs034243–2842222–248122212364263–3023222–248
TsMs042262–268125812612264–2701261
TsMs05126712792259–2632288–2922263–2671263
TsMs062237–2462233–23912362283–3032239–2482236–239
TsMs072297–3033294–30612942296–3022294–297
TsMs082262–2652252–25812612264–2672252–261
TsMs0912882273–2911276128612882276–291
TsMs102283–294129812932284–2942293–299
TsMs112295–3012284–2902284–29112983290–3023284–296
TsMs1212152220–23012122216–24712182211–226
TsMs13119311892181–185121311851189
TsMs1412242210–222121912263210–220
TsMs1512261213121312202213–2171217
TsMs163264–27012313190–2342195–2032190–2653190–231
Locus/taxaT. nelsoni
ISS37
Trichinella T8
ISS124
Trichinella T9
ISS408
T. papuae
ISS572
T. zimbabwensis
ISS1029
T. patagoniensis
ISS1826
NaSize (bp)NaSize (bp)NaSize (bp)NaSize (bp)NaSize (bp)NaSize (bp)
TsMs013265–3023265–3023269–2892286–296
TsMs023158–1792158–1654158–1752158–17011581178
TsMs035222–2675222–2586222–2522241–24712414262–301
TsMs043258–2672247–2613255–2612264–270
TsMs05125912631259127212762267–271
TsMs062236–2392236–2422236–24212252224–2563239–248
TsMs073285–3062288–2942288–29412852296–3022284–293
TsMs083252–2613252–2613255–2642252–2582261–2642264–267
TsMs092273–2823270–2882273–282128012721288
TsMs103284–2983275–2984284–3042284–293
TsMs114281–2964284–2974278–2882286–2962286–2962296–302
TsMs123215–2373211–2424215–240121712481218
TsMs13117711771185120712071185
TsMs142210–2202210–2202214–2201226
TsMs15122512171213121912101224
TsMs162190–2223190–2345190–24511912199–2032190–265
  1. Abbreviation: Na, the number of alleles