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TableĀ 3 Structural variants (SVs) in Giardia AWB, BGS and beaver

From: Benchmarking hybrid assemblies of Giardia and prediction of widespread intra-isolate structural variation

SV PropertyAWBBGSBeaver
No. of SVs3921860483
No. of duplications45 (14,520.4)185 (48,239.6)69 (37,535.0)
No. of deletions46 (15,487.1)298 (34,454.6)74 (46,361.1)
No. of inversions162 (19,437.9)746 (28,782.2)234 (12,866.7)
No. of inverted duplications2 (2257.0)14 (2680.1)0 (0.0)
No. of transversions104 (2.3)436 (20.8)46 (4.0)
No. of insertions33 (299.6)181 (596.4)60 (286.9)
Proportion of genome contained in SVs0.18760.56620.3372
No. of genes in SVs207241513423
  1. Note: Numbers in parentheses are average lengths (bp) of the variants