Skip to main content

Table 1 Primers used in the quantitative RT-PCR in the present study

From: Oncomelania hupensis retains its ability to transmit Schistosoma japonicum 13 years after migration from permissive to non-permissive areas

Gene

Sequence (5′–3′)

Primer length (mer)

Tm (°C)

GC %

Product length (bp)

PSMD4

CCTCACCAACAATTTCCACATCT

23

55.50

43.50

129

GATCACTTATAGCCTTGCGAACAT

24

55.80

41.70

EWB00_005036

ATACAGAAGCAAGTCCTGAA

20

51.30

40.00

149

CTCGCCTAATCCATCTTGT

19

53.01

47.37

EWB00_010161

CTGTATCATAGTCGTCGTATC

21

53.66

42.86

104

GCATCGTTCCTGTTCCTA

18

52.62

50.00

EWB00_002418

TTATACGGTGGAAGCGAAT

19

50.85

42.11

114

GGTGGGATATTAGGAGTTCAT

21

53.66

42.86

EWB00_003584

TGCTATCGGACTCGTGTA

18

49.80

50.00

122

GTAGAGACCATGTATGACAGT

21

50.10

42.90

EWB00_003582

GCATTGAATACAGCAGGAC

19

49.70

47.40

136

TTATAGCAACGGTTCGGTAT

20

50.00

40.00

EWB00_008342

CAATCATCCACTTCAAGATACG

22

53.95

40.91

147

CCAGCGAAGCAGGAGTAT

18

54.90

55.56

EWB00_005617

GTGGTTCGCTACTGTCAT

18

52.62

50.00

145

GATACTCACCGCAACTACA

19

53.01

47.37

EWB00_005592

CTTATGCGTCGTGGATGA

18

52.62

50.00

102

CCAGGATGACCAGAATGAA

19

53.01

47.37

EWB00_010449

TCAATGTTGTCCTGAATGTG

20

51.30

40.00

100

TTGTCTTGGTGTTCTTGGT

19

50.85

42.11

EWB00_011245

CTGTCACACTACAACAAGAAG

21

53.66

42.86

126

GTATTTCGTCACTGCCTTTG

20

53.35

45.00

EWB00_009712

GTAATGAACCTACTACTGTTGG

22

53.95

40.91

106

GTTCGAGCCTCCTGATTG

18

54.90

55.56

EWB00_006199

CAGTTGGAGAGCAAGGAG

18

54.90

55.56

107

TGATGGACAGGAAGGAATAC

20

53.35

45.00

EWB00_000274

GCAACTTCAAGAACCATACA

20

51.30

40.00

120

ATTCCACTACGACCATCTC

19

53.01

47.37

EWB00_006201

CCTGGTGAATCTGGACTTG

19

55.16

52.63

139

CGCCTCTATCTCCTTCTAATC

21

55.61

47.62

  1. Abbreviation: Tm, melting temperature