New genotype invasion of dengue virus serotype 1 drove massive outbreak in Guangzhou, China

Parasites & Vectors

Table 5. Sequence similarity between the 2013 strain (KX225484) and strains isolated in 2014–2016 (%)

Strains	Year	C	E	M	NS1	NS2A	NS2B	NS3	NS4A	NS4B	NS5	CDS
KT187559	2014	100	99.93	99.55	99.90	100	100	99.84	100	100	99.96	99.93
KT187560	2014	100	99.93	100	99.90	99.85	100	99.89	99.73	99.86	99.96	99.90
KT187561	2014	100	99.93	99.55	99.90	100	100	99.73	100	100	99.96	99.90
KT187562	2014	100	99.80	100	99.90	100	100	99.84	100	100	99.96	99.92
KT827375	2014	100	99.86	100	99.90	100	100	99.89	99.73	100	99.93	99.92
KT827377	2014	100	99.93	100	99.90	100	100	99.89	100	100	99.96	99.95
KX225483	2014	100	99.87	100	100	100	100	99.89	100	100	99.96	99.95
KX225484	2014	100	99.93	99.56	99.91	99.85	100	99.89	100	99.87	99.93	99.91
KX225487	2014	100	100	100	100	100	100	100	100	100	100	100
KX459386	2014	100	99.93	100	99.81	99.54	100	99.84	100	99.87	99.85	99.86
KX459387	2014	100	99.87	100	100	100	100	99.89	100	100	99.96	99.95
KX459388	2014	99.67	99.87	100	99.81	99.54	100	99.78	100	99.87	99.85	99.83
KX459389	2014	100	99.80	100	99.91	100	100	99.89	100	100	99.96	99.93
KX459390	2014	100	100	100	100	100	100	100	100	100	100	100
KX459391	2014	100	99.93	100	99.91	100	100	99.84	100	100	99.96	99.93
KX459392	2014	100	99.80	100	99.81	100	99.75	99.84	100	99.73	99.93	99.87
KX621249	2014	100	99.87	100	99.91	100	100	99.84	100	99.87	99.78	99.87
KT827378	2015	100	99.73	100	99.81	100	100	99.84	100	99.86	99.92	99.88
GZ2016-18488	2016	99.33	99.39	99.1	99.62	99.54	99.23	99.03	98.94	98.92	99.10	99.22

ISSN: 1756-3305