Skip to main content

Table 4 Genes with differential alternative splicing corresponding to different components of spliceosome complex based on KEGG pathway analysis

From: Genome-wide transcriptome analysis of the early developmental stages of Echinococcus granulosus protoscoleces reveals extensive alternative splicing events in the spliceosome pathway

Stable gene IDa

KEGG Orthology

Gene name

Definition

EgrG_000478900

K12839

SMNDC1

Survival of motor neuron-related splicing factor 30

EgrG_000666850

K12836

U2AF1

Splicing factor U2AF 35 kDa subunit

EgrG_000446400

K12896

SFRS7

Splicing factor, arginine/serine-rich 7

EgrG_000839000

K13094

RBM5_10

RNA-binding protein 5/10

EgrG_000665700

K13095

SF1

Splicing factor 1

EgrG_001020700

K13098

TLS

FUS RNA-binding protein

EgrG_000083900

K12898

HNRNPF_H

Heterogeneous nuclear ribonucleoprotein F/H

EgrG_000487300

K20100

YTHDC1

YTH domain-containing protein 1

EgrG_000862700

K12824

TCERG1a

CA150 transcription elongation regulator 1

  1. All genes correspond to spliceosome pathway ko03040
  2. aEchinococcus granulosus BioProject PRJEB121
  3. bTCERG1 corresponds to both spliceosome pathway ko03040 and longevity-regulating pathway–worm ko04212