Table 1 In silico analysis showing the size of the mitochondrial COI region from five Culicoides species and 10 NCBI accessions, and their restriction pattern after digestion with SspI
Culicoides species | NCBI GenBank accession no. | PCR product (bp) | Restriction pattern (bp) | Geographical origin |
|---|---|---|---|---|
C. oxystoma | MH135787 | 707 | 385, 233, 89 | China |
C. oxystoma | MF399786 | 683 | 385, 207, 91 | Lebanon |
C. oxystoma | MF399784 | 660 | 385, 182, 93 | Lebanon |
C. kingi | KJ729983 | 690 | 615, 75 | Tunisia |
C. kingi | KF682495 | 472 | 371, 101 | Senegal |
C. enderleini | MF399776 | 681 | 490, 161 | Benin |
C. enderleini | KJ833714 | 472 | 385, 81, 6 | Senegal |
C. nevilli | MF399696 | 687 | 385, 191, 111 | Madagascar |
C. subshultzei | KF682525 | 802 | 701, 101 | South Africa |
C. subshultzei | MH340014 | 564 | 385, 161, 18 | Namibia |