Table 1 BPP analysis that jointly estimates the species tree and species delimitation in the Albitarsis Complex
From: Phylogenetic analysis of the Neotropical Albitarsis Complex based on mitogenome data
Algorithm 0 | ||||||||
|---|---|---|---|---|---|---|---|---|
τ ~ IG(3, 0.04) | ||||||||
θ | 10-species | 9-species (total) | 9-species (albF-albI) | 9-species (albJ-albH) | 9-species (albJ-mara) | Best tree posterior probability | MAP tree | No. trees |
IG(3,0.02) | 0.87 | 0.12 | 0.04 | 0.03 | 0.05 | 0.03 (10-species) | ((((alb_F, alb_I), jan), (alb_G, ((alb_H, (alb_J, mara)), dean))), (alb, ory)); | 4746 |
IG(3,0.01) | 0.92 | 0.08 | 0.04 | 0.02 | 0.02 | 0.11 (10-species) | ((((alb_F, alb_I), jan), (alb, ory)), (alb_G, ((alb_H, (alb_J, mara)), dean))); | 658 |
G(3,0.005) | 0.95 | 0.05 | 0.03 | 0.01 | 0.01 | 0.33 (10-species) | ((((alb_F, alb_I), jan), (alb, ory)), (alb_G, ((alb_H, (alb_J, mara)), dean))); | 73 |
τ ~ IG(3, 0.05) | ||||||||
|---|---|---|---|---|---|---|---|---|
θ | 10-species | 9-species (total) | 9-species (albF-albI) | 9-species (albJ-albH) | 9-species (albJ-mara) | Best tree posterior probability |  | No. trees |
IG(3,0.02) | 0.88 | 0.12 | 0.04 | 0.03 | 0.05 | 0.03 | ((((alb_F, alb_I), jan), (alb, ory)), (alb_G, ((alb_H, (alb_J, mara)), dean))); | 4731 |
IG(3,0.01) | 0.92 | 0.08 | 0.03 | 0.03 | 0.02 | 0.11 | ((((alb_F, alb_I), jan), (alb, ory)), (alb_G, ((alb_H, (alb_J, mara)), dean))); | 550 |
IG(3,0.005) | 0.95 | 0.05 | 0.02 | 0.02 | 0.01 | 0.30 | ((((alb_F, alb_I), jan), (alb, ory)), (alb_G, ((alb_H, (alb_J, mara)), dean))); | 78 |
τ ~ IG(3, 0.06) | ||||||||
|---|---|---|---|---|---|---|---|---|
θ | 10-species | 9-species (total) | 9-species (albF-albI) | 9-species (albJ-albH) | 9-species (albJ-mara) | Best tree posterior probability |  | No. trees |
IG(3,0.02) | 0.88 | 0.12 | 0.05 | 0.03 | 0.04 | 0.03 | ((((alb_F, alb_I), jan), (alb_G, ((alb_H, (alb_J, mara)), dean))), (alb, ory)); | 4894 |
IG(3,0.01) | 0.92 | 0.08 | 0.03 | 0.03 | 0.02 | 0.10 | ((((alb_F, alb_I), jan), (alb, ory)), (alb_G, ((alb_H, (alb_J, mara)), dean))); | 693 |
IG(3,0.005) | 0.95 | 0.05 | 0.02 | 0.02 | 0.01 | 0.32 | ((((alb_F, alb_I), jan), (alb, ory)), (alb_G, ((alb_H, (alb_J, mara)), dean))); | 171 |
Algorithm 1 | ||||||||
|---|---|---|---|---|---|---|---|---|
τ ~ IG(3, 0.04) | ||||||||
θ | 10-species | 9-species (total) | 9-species (albF-albI) | 9-species (albJ-albH) | 9-species (albJ-mara) | Best tree posterior probability |  |  |
IG(3,0.02) | 0.88 | 0.12 | 0.04 | 0.02 | 0.04 | 0.03 | ((((alb_F, alb_I), jan), (alb_G, ((alb_H, (alb_J, mara)), dean))), (alb, ory)); | 5066 |
IG(3,0.01) | 0.92 | 0.08 | 0.04 | 0.02 | 0.02 | 0.11 | ((((alb_F, alb_I), jan), (alb, ory)), (alb_G, ((alb_H, (alb_J, mara)), dean))); | 658 |
IG(3,0.005) | 0.95 | 0.05 | 0.02 | 0.02 | 0.01 | 0.31 | ((((alb_F, alb_I), jan), (alb, ory)), (alb_G, ((alb_H, (alb_J, mara)), dean))); | 79 |
τ ~ IG(3, 0.05) | ||||||||
|---|---|---|---|---|---|---|---|---|
θ | 10-species | 9-species (total) | 9-species (albF-albI) | 9-species (albJ-albH) | 9-species (albJ-mara) | Best tree posterior probability |  | No. trees |
IG(3,0.02) | 0.88 | 0.12 | 0.04 | 0.02 | 0.05 | 0.03 | ((((alb_F, alb_I), jan), (alb, ory)), (alb_G, ((alb_H, (alb_J, mara)), dean))); | 5151 |
IG(3,0.01) | 0.93 | 0.07 | 0.03 | 0.02 | 0.02 | 0.11 | ((((alb_F, alb_I), jan), (alb, ory)), (alb_G, ((alb_H, (alb_J, mara)), dean))); | 738 |
IG(3,0.005) | 0.95 | 0.05 | 0.02 | 0.01 | 0.01 | 0.32 | ((((alb_F, alb_I), jan), (alb, ory)), (alb_G, ((alb_H, (alb_J, mara)), dean))); | 70 |
τ ~ IG(3, 0.06) | ||||||||
|---|---|---|---|---|---|---|---|---|
θ | 10-species | 9-species (total) | 9-species (albF-albI) | 9-species (albJ-albH) | 9-species (albJ-mara) | Best tree posterior probability |  | No. trees |
IG(3,0.02) | 0.88 | 0.12 | 0.04 | 0.02 | 0.04 | 0.03 | ((((alb_F, alb_I), jan), (alb, ory)), (alb_G, ((alb_H, (alb_J, mara)), dean))); | 4792 |
IG(3,0.01) | 0.92 | 0.08 | 0.03 | 0.02 | 0.02 | 0.11 | ((((alb_F, alb_I), jan), (alb, ory)), (alb_G, ((alb_H, (alb_J, mara)), dean))); | 686 |
IG(3,0.005) | 0.95 | 0.05 | 0.02 | 0.01 | 0.01 | 0.31 | ((((alb_F, alb_I), jan), (alb, ory)), (alb_G, ((alb_H, (alb_J, mara)), dean))); | 75 |