Sequencing of hsp70 for discernment of species from the Leishmania (Viannia) guyanensis complex from endemic areas in Colombia

Hoyos, Juliana; Rosales-Chilama, Mariana; León, Cielo; González, Camila; Gómez, María Adelaida

doi:10.1186/s13071-022-05438-w

Table 1 Features of the clinical samples included in this study

From: Sequencing of hsp70 for discernment of species from the Leishmania (Viannia) guyanensis complex from endemic areas in Colombia

Strain code	Geographical origin within Colombia (department)	Source	Species identity using reference typing method	Reference typing method	Year of isolation	Species typing based on hsp70 sequencing	Leishmania hsp70 sequence accession number
12581	Valle del Cauca	Human	L. (V.) panamensis	Monoclonal antibodies and MLEE	2016	L. (V.) panamensis	ON885965
12615	Valle del Cauca	Human	L. (V.) panamensis	Monoclonal antibodies	2016	L. (V.) panamensis	ON806897
12578	Valle del Cauca	Human	L. (V.) panamensis	Monoclonal antibodies	2016	L. (V.) panamensis	ON806896
2183	Nariño	Human	L. (V.) panamensis	Monoclonal antibodies and MLEE	1985	L. (V.) panamensis	ON806884
12563	Valle del Cauca	Human	L. (V.) panamensis	Monoclonal antibodies	2016	L. (V.) panamensis	ON806894
2198	Nariño	Human	L. (V.) panamensis	Monoclonal antibodies and MLEE	1984	L. (V.) panamensis	ON806885
2168	Nariño	Human	L. (V.) panamensis	Monoclonal antibodies and MLEE	1984	L. (V.) panamensis	ON806881
2173	Nariño	Human	L. (V.) panamensis	Monoclonal antibodies and MLEE	1984	L. (V.) panamensis	ON806883
2169	Nariño	Human	L. (V.) panamensis	Monoclonal antibodies and MLEE	1984	L. (V.) panamensis	ON806882
2363	Nariño	Human	L. (V.) panamensis	Monoclonal antibodies and MLEE	1984	L. (V.) panamensis	ON806890
5967	Risaralda	Human	L. (V.) panamensis	Monoclonal antibodies and MLEE	2011	L. (V.) panamensis	ON806892
2277	Nariño	Human	L. (V.) panamensis	Monoclonal antibodies and MLEE	1985	L. (V.) panamensis	ON806886
7123	Valle del Cauca	Human	L. (V.) panamensis	Monoclonal antibodies and MLEE	2012	L. (V.) panamensis	ON806893
2420	Nariño	Human	L. (V.) panamensis	Monoclonal antibodies and MLEE	1985	L. (V.) panamensis	ON806891
2343	Nariño	Human	L. (V.) panamensis	Monoclonal antibodies and MLEE	1985	L. (V.) panamensis	ON806888
2330	Nariño	Human	L. (V.) panamensis	Monoclonal antibodies and MLEE	1985	L. (V.) panamensis	ON806887
12567	Valle del Cauca	Human	L. (V.) panamensis	Monoclonal antibodies	2016	L. (V.) panamensis	ON806895
2350	Nariño	Human	L. (V.) panamensis	Monoclonal antibodies and MLEE	1985	L. (V.) panamensis	ON806889
12,985	Valle del Cauca	Human	L. (V.) panamensis	Monoclonal antibodies	2017	L. (V.) panamensis	ON885966
12,637	Valle del Cauca	Human	L. (V.) panamensis	Monoclonal antibodies	2016	L. (V.) panamensis	ON806898
A076	Tolima	Human	L. (V.) guyanensis	Monoclonal antibodies	2006	L. (V.) guyanenesis	ON806900
A073	Tolima	Human	L. (V.) guyanensis	Monoclonal antibodies	2006	L. (V.) guyanenesis	ON806899
A192	Tolima	Human	L. (V.) guyanensis	Monoclonal antibodies	2009	L. (V.) guyanenesis	ON806901
A025	Tolima	Human	L. (V.) guyanensis	Monoclonal antibodies	2006	L. (V.) guyanenesis	ON885964
L76	Amazonas	Human	L. (V.) guyanensis	Monoclonal antibodies	1982	L. (V.) guyanenesis	ON885963
13222	Valle del Cauca	Human	L. (V.) braziliensis	Monoclonal antibodies	2018	L. (V.) braziliensis	ON548520

hsp70 Heat-shock protein 70 gene,L. (V.) Leishmania (Viannia), MLEE Multilocus enzyme electrophoresis

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ISSN: 1756-3305

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