Table 4 Summary of mean percent prevalence, percent relative abundance (RA), and 95% confidence intervals (CI) for 11 genera shared among all groups with at least 20% prevalence
From: The microbial community associated with Parascaris spp. infecting juvenile horses
Genus | Whole worm | Organs | ||||||
|---|---|---|---|---|---|---|---|---|
Location | Prevalence (%) | RA (%) | 95% CI | Location | Prevalence (%) | RA (%) | 95% CI | |
Acinetobacter | I | 50.00 | 0.51 | (0.00–1.01) | MG | 45.00 | 0.89 | (0.29–1.49) |
|  | M | 42.86 | 0.39 | (0.01–0.76) | MI | 26.09 | 0.07 | (0.02–0.12) |
|  | F | 25.00 | 1.57 | (0.00–4.95) | FI | 18.18 | 0.05 | (0.00–0.10) |
|  |  |  |  |  | FG | 13.33 | 0.12 | (0.00–0.35) |
ANPR | F | 50.00 | 0.72 | (0.07–1.38) | MG | 40.00 | 0.53 | (0.07–1.00) |
|  | M | 42.86 | 0.41 | (0.00–0.94) | FI | 27.27 | 0.25 | (0.04–0.45) |
|  | I | 25.00 | 0.92 | (0.00–2.60) | MI | 26.09 | 0.14 | (0.02–0.26) |
|  |  |  |  |  | FG | 13.33 | 0.12 | (0.00–0.30) |
Clostridium sensu stricto 1 | F | 87.50 | 14.66 | (4.30–25.02) | FI | 72.73 | 7.41 | (2.66–12.16) |
|  | M | 85.71 | 17.78 | (5.66–29.90) | MG | 70.00 | 6.64 | (3.87–9.41) |
|  | I | 62.50 | 6.13 | (0.00–14.27) | MI | 69.57 | 11.10 | (4.25–17.95) |
|  |  |  |  |  | FG | 26.67 | 6.75 | (0.00–18.75) |
Gemella | F | 50.00 | 0.66 | (0.00–1.32) | MI | 60.87 | 0.59 | (0.34–0.83) |
|  | I | 37.50 | 1.32 | (0.00–2.81) | FI | 59.09 | 0.51 | (0.25–0.77) |
|  | M | 28.57 | 0.36 | (0.00–0.82) | MG | 25.00 | 0.24 | (0.01–0.48) |
|  |  |  |  |  | FG | 6.67 | 0.05 | (0.00–0.15) |
Janthinobacterium | I | 62.50 | 3.52 | (0.00–7.39) | MG | 85.00 | 5.02 | (3.16–6.89) |
|  | M | 42.86 | 0.55 | (0.00–1.50) | MI | 39.13 | 0.72 | (0.16–1.27) |
|  | F | 37.50 | 0.63 | (0.00–1.34) | FG | 33.33 | 4.32 | (0.49–8.16) |
|  |  |  |  |  | FI | 18.18 | 0.24 | (0.00–0.54) |
Lactobacillus | M | 100.00 | 24.15 | (9.03–39.28) | FI | 100.00 | 41.34 | (34.52–48.15) |
|  | I | 100.00 | 20.15 | (9.26–31.03) | MI | 100.00 | 36.06 | (28.71–43.42) |
|  | F | 100.00 | 30.46 | (17.43–43.50) | MG | 95.00 | 32.31 | (23.82–40.80) |
|  |  |  |  |  | FG | 66.67 | 25.82 | (13.65–38.00) |
Reyranella | I | 50.00 | 1.53 | (0.00–3.51) | FG | 93.33 | 12.16 | (8.05–16.27) |
|  | M | 42.86 | 2.12 | (0.00–4.93) | MI | 78.26 | 5.23 | (2.83–7.63) |
|  | F | 37.50 | 1.00 | (0.00–2.19) | FI | 59.09 | 0.90 | (0.50–1.30) |
|  |  |  |  |  | MG | 15.00 | 1.21 | (0.00–2.89) |
Sarcina | M | 100.00 | 22.13 | (6.18–38.08) | FI | 90.91 | 26.03 | (18.73–33.33) |
|  | F | 100.00 | 27.94 | (15.16–40.72) | MI | 82.61 | 13.82 | (7.89–19.74) |
|  | I | 87.50 | 25.37 | (7.81–42.92) | MG | 60.00 | 10.05 | (4.85–15.25) |
|  |  |  |  |  | FG | 20.00 | 1.33 | (0.00–2.91) |
Sphingomonas | I | 50.00 | 2.61 | (0.00–5.30) | MG | 85.00 | 4.91 | (2.60–7.22) |
|  | M | 42.86 | 2.39 | (0.00–5.09) | MI | 73.91 | 2.70 | (1.48–3.92) |
|  | F | 25.00 | 0.37 | (0.00–0.93) | FG | 60.00 | 8.67 | (3.70–13.64) |
|  |  |  |  |  | FI | 36.36 | 0.37 | (0.13–0.62) |
Streptococcus | M | 100.00 | 10.05 | (4.67–15.43) | MG | 80.00 | 3.09 | (1.05–5.13) |
|  | I | 87.50 | 9.16 | (2.77–15.55) | FI | 68.18 | 4.86 | (1.42–8.31) |
|  | F | 75.00 | 6.34 | (2.09–10.58) | MI | 65.22 | 4.90 | (1.82–7.98) |
|  |  |  |  |  | FG | 20.00 | 0.48 | (0.00–1.13) |
Veillonella | M | 85.71 | 3.75 | (1.70–5.79) | FI | 81.82 | 3.06 | (1.27–4.85) |
|  | I | 75.00 | 2.38 | (0.83–3.93) | MI | 69.57 | 1.82 | (0.78–2.87) |
|  | F | 75.00 | 2.97 | (0.14–5.80) | MG | 50.00 | 0.58 | (0.19–0.97) |
|  |  |  |  |  | FG | 13.33 | 0.21 | (0.00–0.55) |