Fig. 3From: Amplicon sequencing allows differential quantification of closely related parasite species: an example from rodent Coccidia (Eimeria)Phylogenetic analysis of Eimeria spp. for 18S rRNA gene reference sequences. Clades containing all reference sequences for E. ferrisi (yellow), E. falciformis (green) and E. vermiformis (blue) are collapsed and coloured. Coloured boxes represent the species assignment of ASVs based on phylogenetic clusteringBack to article page