Mitogenomic phylogenies suggest the resurrection of the subfamily Porrocaecinae and provide insights into the systematics of the superfamily Ascaridoidea (Nematoda: Ascaridomorpha), with the description of a new species of Porrocaecum

Table 3 Annotations and gene organization of Porrocaecum moraveci sp. n

Gene	Type	Start (bp)	End (bp)	Length (bp)	Start codon	Stop codon	Anticodon	Strand^a	Gap or overlap^b
cox1	CDS	1	1575	1575	TTG	TAG		+	− 1
tRNA-Cys ©)	tRNA	1575	1632	58			GCA	+	0
tRNA-Met (M)	tRNA	1633	1693	61			CAU	+	2
tRNA-Asp (D)	tRNA	1696	1752	57			GUC	+	4
tRNA-Gly (G)	tRNA	1757	1812	56			UCC	+	− 9
cox2	CDS	1804	2514	711	TTG	TAG		+	2
tRNA-His (H)	tRNA	2517	2571	55			GUG	+	0
rrnL	rRNA	2572	3537	966				+	0
nad3	CDS	3538	3867	330	GTG	TAG		+	0
nad5	CDS	3868	5451	1584	ATT	TAG		+	- 2
tRNA-Ala (A)	tRNA	5450	5505	56			UGC	+	4
tRNA-Pro (P)	tRNA	5510	5565	56			UGG	+	0
tRNA-Val (V)	tRNA	5566	5621	56			UAC	+	0
nad6	CDS	5622	6056	435	TTG	TAG		+	0
nad4L	CDS	6057	6290	234	ATT	TAG		+	0
tRNA-Trp (W)	tRNA	6291	6348	58			UCA	+	0
tRNA-Glu (E)	tRNA	6349	6407	59			UUC	+	0
rrnS	rRNA	6408	7112	705				+	0
tRNA-Ser2 (S2)	tRNA	7113	7162	50			UGA	+	0
NCR1	Non-coding region	7163	8335	1173				+	0
tRNA-Asn (N)	tRNA	8336	8391	56			GUU	+	0
tRNA-Tyr (Y)	tRNA	8392	8450	59			GUA	+	0
nad1	CDS	8451	9323	873	TTG	TAG		+	1
atp6	CDS	9325	9924	600	ATT	TAA		+	1
tRNA-Lys (K)	tRNA	9926	9988	63			UUU	+	0
tRNA-Leu2 (L2)	tRNA	9989	10,043	55			UAA	+	0
tRNA-Ser1 (S1)	tRNA	10,044	10,096	53			UCU	+	0
nad2	CDS	10,097	10,940	844	GTG	T		+	0
tRNA-Ile (I)	tRNA	10,941	10,999	59			GAU	+	5
tRNA-Arg ®)	tRNA	11,005	11,060	56			ACG	+	0
tRNA-Gln (Q)	tRNA	11,061	11,115	55			UUG	+	2
tRNA-Phe (F)	tRNA	11,118	11,176	59			GAA	+	0
cytb	CDS	11,177	12,281	1105	TTG	T		+	0
tRNA-Leu1 (L1)	tRNA	12,282	12,338	57			UAG	+	0
cox3	CDS	12,339	13,106	768	TTG	TAG		+	10
tRNA-Thr (T)	tRNA	13,117	13,171	55			UGU	+	0
NCR2	Non-coding region	13,172	13,272	101				+	0
nad4	CDS	13,273	14,400	1128	TTG	TAA		+	0
NCR3	Non-coding region	14,401	14,517	117				+

CDS Coding sequence (coding region of a gene), NCR non-coding region, tRNA transfer RNA
^aThe forward strand is marked as “+” and the reverse strand is marked as “−”
^bPositive number in the “Gap or overlap” column indicates the length of the intergenic sequence, with negative numbers indicating the length (absolute number) that adjacent genes overlap (negative sign)

ISSN: 1756-3305