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Table 3 Average estimates of non-synonymous and synonymous genetic divergence and genetic divergence corrected for polymorphism levels between North American (Ap-ha) and European (host-generalist ecotype) genomes

From: Genomic analyses indicate the North American Ap-ha variant of the tick-vectored bacterium Anaplasma phagocytophilum was introduced from Europe

Measures of genetic divergencea

Vector-upregulated genes (n = 52)

Reservoir-upregulated genes (n = 67)

Core genes (n = 125)

Kruskal–Wallis rank sum test results (df = 2)c

μ (SD)b

μ (SD)b

μ (SD)b

dXY non-synonymous

0.01158a (0.01119)

0.00900a (0.01314)

0.00514b (0.00508)

χ2 = 14.60

P = 0.0007#

dA non-synonymous

0.01001a (0.00991)

0.00741a,b (0.01064)

0.00446b (0.00475)

χ2 = 14.10

 P = 0.0009#

dXY synonymous

0.04678 (0.03870)

0.04509 (0.03392)

0.04266 (0.02599)

χ2 = 0.404

P = 0.8170

dA synonymous

0.03982 (0.03482)

0.03767 (0.02827)

0.03595 (0.02362)

χ2 = 0.433

P = 0.8054

  1. adXY, Average estimate of genetic divergence (number of nucleotide differences per locus); dA, genetic divergence corrected for polymorphism level (average number of net nucleotide substitutions per site for each gene)
  2. bAverages (μ) followed by different lowercase letters indicate which comparisons were significantly different from one another
  3. cP-values marked with a hash sign (#) indicate comparisons that were significantly different between geographic regions at P < 0.05 according to the Kruskal-Wallis rank sum test results