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Table 1 Summary of assembled Borrelia replicons

From: Characterisation and comparative genomics of three new Varanus-associated Borrelia spp. from Indonesia and Australia

Replicon

Complete/partial

Accession no.

Length (base pairs)

CDS (no.)

Mean coverage (Illumina/ONT)

Borrelia salvatorii strain RT1S

 

 Chromosome

Complete

CP088943

952,250

864

1359.7/609.6

 lp23

Complete

CP088944

23,856

34

3554.4/780.8

 lp25

Complete

CP088945

25,673

32

5506.1/595.4

 cp27

Complete

CP088946

27,661

28

4285.1/438.8

 lp27

Complete

CP088947

25,416

32

5015.2/626.5

 lp30

Complete

CP088948

30,113

37

9638.7/1231.5

 lp30-B

Partial

CP088949

30,059

34

7106.5/781.2

 lp51

Complete

CP088950

51,384

61

2751.7/378.2

 lp83

Complete

CP088951

82,803

86

2588.0/369.5

Borrelia salvatorii strain RT5S

 

 Chromosome

Complete

CP088936

942,663

856

1464.0/388.8

 lp25

Complete

CP088937

25,456

30

8945.1/838.0

 cp27

Complete

CP088938

27,771

29

4716.3/318.8

 lp27

Complete

CP088939

27,011

30

7108.5/773.9

 lp30

Complete

CP088940

30,932

36

5415.2/573.9

 lp44

Partial

CP088941

44,552

52

3422.8/319.1

 lp83

Complete

CP088942

83,220

86

2669.2/399.9

‘Candidatus Borrelia undatumii’ AG58

 

 Chromosome

Complete

CP086555

912,448

863

101.3/-

 lp6

Partial

CP129596

9,178

4

179.3/-

 lp9

Partial

CP129597

12,342

8

151.8/-

 lp12

Partial

CP129598

12,681

14

129.9/-

 lp17

Partial

CP129599

17,500

22

91.9/-

 lp31

Partial

CP129600

37,310

31

179.1/-

 lp65

Partial

CP129601

65,850

74

170.2/-

‘Candidatus Borrelia rubricentralis’ P9F1

 

 Chromosome

Complete

CP129407

936,962

851

24.4/-

 lp23

Partial

CP129410

23,742

25

21.2/-

 lp24

Partial

CP129411

24,219

31

31.3/-

 lp25

Partial

CP129412

25,027

26

25.1/-

 cp32-B

Complete

CP129409

32,481

39

24.7/-

 cp32

Complete

CP129408

32,878

41

36.2/-

 lp36

Partial

CP129413

36,508

42

28.7/-

 lp74

Partial

CP129414

74,710

80

26.4/-

  1. lp Linear plasmid, cp circular plasmid, CDS coding sequence, ONT Oxford Nanopore Technologies