Table 2 Strongyloides stercoralis with the different cox-1 haplotypes from 23 patients
From: Strongyloides stercoralis genotyping in a human population in southwestern Iran
cox-1 Haplotypea | Patient number, locationb | S. stercoralis individuals with this sequencec | Number (%) of worms with this cox-1 haplotype |
|---|---|---|---|
LC772965 (cluster 1, Iran-spec.) | 1 Khorramshahr 2 Abadan 4 Abadan 14 Abadan 15 Abadan 21 Abadan 22 Abadan 23 Abadan | A1-P1.adult (het)d [Worm 1], B1-P1.adult (het)d [Worm 2], C1-P1.adult (I or het), D1-P1.adult (het)d [Worm 3], E1-P1.larva, F1-P1.larva (het), G1-P1. larvad A2-P2.adult (het)d [Worm 4], B2-P2.adult (het)d [Worm 5], C2-P2.adult (het)d [Worm 6], D2-P2.adult (het), E2-P2.larva (het), F2-P2.larva (het), G2-P2. larva (het) A4-P4.adult (II), B4-P4.larva (II), C4-P4.larva (II), D4-P4.larva (II), E4-P4.larva (II), F4-P4.larva (II) B12-P14.adult (II)d [Worm 31], C12-P14.adult (II)d [Worm 32], D12-P14.adult (II), E12-P14.larva (II), G12-P14.larva (II) B1-P15.larva (II), C1-P15.larva (het), D1-P15.larva, E1-P15.larva, F1-P15.larva, G1-P15.larva A7-P21.larva, B7-P21.larva, C7-P21.larva, D7-P21.larva (I), E7-P21.larva (I), F7-P21.larva, G7-P21.larva A8-P22.larva (het), B8-P22.larva (het), C8-P22.larva (het), D8-P22.larva (het), F8-P22. larva (het), G8-P22. larva (I) A9-P23.adult (II)d [Worm 54], B9-P23.adult (II), C9-P23.adult (II), D9-P23.adult (II), E9-P23.larvad, F9-P23.larva, G9-P23. larva (II) | 51 (37.5) |
LC772966 (cluster 2) | 11 Abadan 13 Abadan | A10-P11.adult (II)d [Worm 24], B10-P11.adult (II)d [Worm 25], C10-P11.larva, D10-P11.larva, G10-P11.larva, G11-P13.larva, F10-P11.larva (II) D11-P13.larva, E11-P13.larva | 9 (6.62) |
LC772967 (cluster 5) | 3 Abadan 8 Abadan 10 Abadan 16 Abadan 17 Abadan 19 Abadan 24 Abadan | B3-P3.adult (II), C3-P3.adult (II), D3-P3.adult (II), E3-P3.adult (II), F3-P3.larva (II), G3-P3.larva (II) B8-P8.larva, C8-P8.larva, D8-P8.larva A9-P10.adult (het)d [Worm 22], B9-P10.larva (het) A2-P16.adult (II)d [Worm 36], C2-P16.adult, D2-P16.adult (II)d [Worm 37], E2-P16.larva (II), F2-P16.larva (II), G2-P16.larva A3-P17.adult (II)d [Worm 38], B3-P17.adult (II)d [Worm 39], C3-P17.adult (II), D3-P17.adult (II), E3-P17.larva (II), F3-P17.larva B5-P19.larva (II), C5-P19.larva (II), D5-P19.larva (II), E5-P19.larva (II), F5-P19.larva (II), G5-P19.larva (II) A10-P24.adult (II)d [Worm 56], B10-P24.larva (II), C10-P24.larva, D10-P24.larva, E10-P24.larva, F10-P24.larva (II)d, G10-P24.larva (II) | 36 (26.47) |
LC772968 (cluster 4) | 13 Abadan 18 Ahvaz | A11-P13.adult (het II/III)d [Worm 26], B11-P13.adult (het II/III)d [Worm 27], C11-P13.larva (III), F11-P13.larva (het II/III) A4-P18.adult (III), B4-P18.adult (het II/III)d [Worm 41], C4-P18.adult (het II/III), D4-P18.larva (het II/III), F4-P18.larva (III), G4-P18.larva (het II/III) | 10 (7.35) |
LC772969 (cluster 1, Iran-spec.) | 14 Abadan | A12-P14.adult (II)d [Worm 30] | 1 (0.74) |
LC772970 (cluster 1, Iran-spec.) | 15 Abadan | A1-P15.larvad | 1 (0.74) |
LC772971 (cluster 5) | 3 Abadan 16 Abadan | A3-P3.adult (II)d [Worm 7] B2-P16.adult | 2 (1.47) |
LC772972 (cluster 2) | 5 Abadan | A5-P5.adult (II)d [Worm 12], B5-P5.adult (II), C5-P5.adult (II), D5-P5.adult (II), E5-P5.larva, F5-P5.larva (II), G5-P5.larva | 7 (5.14) |
LC772973 (cluster 3) | 9 Khorramshahr 20 Abadan | 9-P9.adult (II)d [Worm 20], 10-P9.larva, 11-P9.larva, 13-P9.larvad, 14-P9.larva, 15-P9.larva A6-P20.adult (II), B6-P20.adult (II), C6-P20.adult (II), D6-P20.adult (II) | 10 (7.35) |
LC772974 (cluster 5) | 6 Khorramshahr | A6-P6.larva (II), C6-P6.larva (II), D6-P6.larva (II) | 3 (2.2) |
LC772975 (cluster 1, Iran-spec.) | 7 Khorramshahr | A7-P7.adult (II), C7-P7.larva (II), E7-P7.larva (II), F7-P7.larva (II) | 4 (2.94) |
LC772976 (cluster 1, Iran-spec.) | 7 Khorramshahr | B7-P7.adult (II) | 1 (0.74) |
LC772977 (cluster 4) | 18 Ahvaz | E4-P18.larva | 1 (0.74) |