Table 1 Schistosoma microsatellite panels, loci used, allele size ranges (base pairs) and fluorescent dye. Loci Shae_05 and Shae_15 were omitted from analyses including miracidia
From: Genetic characterization of schistosome species from cattle in Côte d’Ivoire
Panel | Locus | Allele range | Fluorescent dye |
|---|---|---|---|
Panel 1 | C111 | 185–209 | ATTO565 (red) |
Shae_01 | 240–282 | HEX (green) | |
Shae_03 | 291–375 | FAM (blue) | |
Shae_06 | 305–331 | ATTO550 (yellow) | |
Shae_09 | 190–241 | FAM (blue) | |
Panel 2 | Shae_02 | 152–224 | ATTO550 (yellow) |
Shae_04 | 264–313 | FAM (blue) | |
Shae_05 | 261–291 | ATTO550 (yellow) | |
Shae_11 | 172–209 | HEX (green) | |
Shae_12 | 241–262 | ATTO565 (red) | |
Shae_13 | 163–229 | FAM (blue) | |
Shae_15 | 270–297 | HEX (green) |