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Table 2 Genetic diversity indices for schistosomes from cattle at six locations across Côte d’Ivoire based on 12 microsatellite loci

From: Genetic characterization of schistosome species from cattle in Côte d’Ivoire

Location

N

NH

A

Ar

Ho

He

PHWE

FIS

Ouangolodougou

21

11

9.92

4.78

0.556

0.754

2.7 × 10–12

0.238

  

(3, 18)

(3.75–5.58)

(0.484–0.619)

(0.679–0.773)

 

(0.129–0.308)

Ferkessédougou

80

42

11.25

5.00

0.574

0.725

1.2 × 10–15

0.222

  

(4, 22)

(4.33–5.58)

(0.543–0.598)

(0.703–0.73)

 

(0.178–0.255)

Abengourou

6

3

4.92

3.88

0.528

0.644

1.9 × 10–2

0.185

  

(2, 11)

(3.00–4.58)

(0.444–0.611)

(0.468–0.650)

 

(-0.042–0.224)

Duekoué

14

7

7.25

4.46

0.527

0.679

1.1 × 10–8

0.248

  

(2, 14)

(3.33–5.42)

(0.468–0.577)

(0.599–0.687)

 

(0.135–0.292)

Agboville

14

7

8.50

4.97

0.600

0.744

2.1 × 10–7

0.199

  

(3, 14)

(3.67–5.92)

(0.542–0.652)

(0.671–0.737)

 

(0.055–0.248)

Sikensi

11

6

6.00

4.15

0.542

0.674

1.8 × 10–6

0.24

  

(2, 11)

(3.33–4.83)

(0.472–0.601)

(0.578–0.677)

 

(0.054–0.295)

  1. N, number of schistosome samples (maximally two per host individual); NH, number of host individuals from which schistosomes were collected; A, average (minimum, maximum) number of alleles across loci; Ar, mean (+ 95% CI) allelic richness across loci; Ho, mean (+ 95% CI) observed heterozygosity across loci; He, mean (+ 95% CI) estimated heterozygosity across loci; PHWE, probability of deviation from Hardy-Weinberg equilibrium; FIS, mean (+ 95% CI) fixation index across loci