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Table 5 Genetic diversity indices for schistosomes from within individual cattle hosts based on 10 microsatellite loci

From: Genetic characterization of schistosome species from cattle in Côte d’Ivoire

Life stage

Host

N

A

Ar

Ho

He

PHWE

FIS

Flukes

Cfr20

20

9.7

6.54

0.628

0.753

2.5 × 10–6

0.181

  

(3, 17)

(5.50–7.40)

(0.567–0.685)

(0.699–0.758)

 

(0.058–0.256)

Flukes

Cfr78

18

8.8

6.30

0.627

0.75

1.3 × 10–6

0.177

  

(3, 15)

(5.20–7.40)

(0.558–0.687)

(0.681–0.757)

 

(0.059–0.236)

Flukes

Cfr84

22

8.7

6.13

0.664

0.751

1.1 × 10–7

0.139

  

(3, 14)

(5.10–7.00)

(0.617–0.707)

(0.704–0.755)

 

(0.043–0.189)

Miracidia

195

17

7.6

5.70

0.585

0.741

2.8 × 10–7

0.229

  

(2, 13)

(4.70–6.60)

(0.494–0.654)

(0.666–0.732)

 

(0.072–0.333)

Miracidia

232

10

5.8

4.75

0.490

0.642

3.1 × 10–5

0.239

  

(3, 10)

(3.80–5.50)

(0.455–0.525)

(0.531–0.650)

 

(0.063–0.282)

Miracidia

236

11

6.3

5.07

0.560

0.677

2.2 × 10–4

0.235

  

(2, 12)

(4.20–5.80)

(0.486–0.625)

(0.566–0.693)

 

(0.087–0.269)

Miracidia

BV34

16

8.3

6.08

0.523

0.765

5.2 × 10–15

0.363

  

(3, 14)

(5.10–6.91)

(0.460–0.564)

(0.670–0.763)

 

(0.254–0.405)

Miracidia

BV04

10

5.6

4.61

0.475

0.643

2.3 × 10–7

0.325

  

(2, 8)

(3.60–5.40)

(0.370–0.570)

(0.517–0.657)

 

(0.011–0.444)

  1. Schistosomes from slaughtered cattle Cfr20, Cfr78 and Cfr84 and miracidia from live cattle 195, 232, 236, BV34 and BV04 on farms in Ferkessédougou, Côte d’Ivoire
  2. Host, host ID; N, number of parasite samples; A, average (minimum, maximum) number of alleles across loci; Ar, mean (+ 95% CI) allelic richness across loci; Ho, mean (+ 95% CI) observed heterozygosity across loci; He, mean (+ 95% CI) estimated heterozygosity across loci; PHWE, probability of deviation from Hardy-Weinberg equilibrium; FIS, mean (+ 95% CI) fixation index across loci