Skip to main content

Table 3 Coefficients of genetic diversity of Oncomelania hupensis robertsoni at different loci

From: The genetic diversity of Oncomelania hupensis robertsoni, intermediate hosts of Schistosoma japonicum in hilly regions of China, using microsatellite markers

Population

Index

Microsatellite loci

Mean

P82

P84

T4-22

T5-11

T5-13

T6-27

Lianyi (HQ1)

Na

5

2

4

8

8

5

5.333

Ho

0.267

0.033

0.433

0.967

1.000

0.967

0.611

He

0.688

0.500

0.660*

0.838*

0.837*

0.760*

0.714

F

0.612

0.933

0.343

− 0.153

− 0.195

– 0.271

0.212

PIC

0.636

0.375

0.597

0.817

0.816

0.719

0.660

Jinsuo (HQ2)

Na

4

0

4

6

4

5

3.833

Ho

0.100

0.000

0.100

0.967

0.900

0.967

0.506

He

0.722

0.000

0.722

0.656*

0.598*

0.596*

0.549

F

0.862

0.000

0.862

− 0.470

− 0.500

− 0.616

0.028

PIC

0.671

0.000

0.671

0.599

0.518

0.516

0.496

Caizhuang (MD1)

Na

3

3

6

6

3

9

5.000

Ho

0.133

0.067

0.233

1.000

0.967

1.000

0.567

He

0.625

0.625

0.781

0.651*

0.517*

0.743*

0.657

F

0.787

0.893

0.687

− 0.478

− 0.760

− 0.314

0.136

PIC

0.555

0.555

0.748

0.594

0.400

0.706

0.593

Xiaoqiao (XY1)

Na

2

2

4

8

11

9

6.000

Ho

0.000

0.000

0.667

1.000

1.000

0.933

0.600

He

0.500

0.500

0.143*

0.621*

0.768*

0.629*

0.527

F

NA

NA

− 1.899

− 0.576

− 0.308

− 0.421

− 0.801

PIC

0.375

0.375

0.139

0.548

0.735

0.559

0.455

Qiandian (EY1)

Na

0

2

3

3

6

6

3.333

Ho

0.000

0.100

0.133

1.000

1.000

1.000

0.539

He

0.000

0.500

0.611

0.516*

0.707*

0.578*

0.485

F

0.000

0.800

0.749

− 0.938

− 0.386

− 0.731

− 0.101

PIC

0.000

0.375

0.535

0.399

0.667

0.488

0.411

Yongle (EY2)

Na

2

2

6

7

8

5

5.000

Ho

0.333

0.033

0.900

1.000

1.000

1.000

0.711

He

0.500*

0.500

0.767*

0.757*

0.818*

0.664*

0.668

F

0.333

0.933

− 0.170

− 0.306

− 0.208

− 0.499

0.014

PIC

0.375

0.375

0.727

0.721

0.795

0.599

0.599

Liuguanchang (DL1)

Na

2

2

6

7

6

9

5.333

Ho

0.300

0.033

0.500

1.000

0.967

1.000

0.633

He

0.500*

0.500

0.784*

0.771*

0.646*

0.806*

0.668

F

0.400

0.933

0.384

-0.303

-0.440

-0.237

0.123

PIC

0.375

0.375

0.753

0.741

0.589

0.779

0.602

Wuxing (DL2)

Na

2

0

5

5

7

2

3.500

Ho

0.367

0.000

0.267

1.000

1.000

1.000

0.606

He

0.500*

0.000

0.673

0.705*

0.729*

0.500*

0.518

F

0.267

0.000

0.641

− 0.380

− 0.345

− 0.879

− 0.139

PIC

0.375

0.000

0.617

0.660

0.687

0.375

0.452

Populations

Index

Microsatellite loci

Mean

P82

P84

T4-22

T5-11

T5-13

T6-27

Machang (DL3)

Na

2

0

7

6

5

2

3.667

Ho

0.172

0.000

0.690

1.000

0.931

1.000

0.632

He

0.500*

0.000

0.775*

0.773*

0.731*

0.500*

0.547

F

0.655

0.000

0.110

− 0.288

− 0.293

− 1.000

− 0.163

PIC

0.375

0.000

0.740

0.739

0.686

0.375

0.486

Fengming (DL4)

Na

0

2

6

6

10

6

5.000

Ho

0.000

0.621

0.586

1.000

1.000

0.966

0.701

He

0.000

0.500*

0.637*

0.777

0.822*

0.716*

0.575

F

0.000

− 0.241

0.089

− 0.290

− 0.203

− 0.327

− 0.007

PIC

0.000

0.375

0.573

0.741

0.800

0.672

0.527

Dianzhong (WS1)

Na

8

2

13

9

19

12

10.500

Ho

0.633

0.167

0.933

0.933

0.933

0.967

0.761

He

0.846*

0.500*

0.874*

0.783*

0.919*

0.830

0.792

F

0.252

0.667

− 0.064

− 0.211

− 0.021

− 0.175

0.075

PIC

0.828

0.375

0.862

0.756

0.913

0.809

0.757

Huilong (JC1)

Na

6

2

7

5

6

5

5.167

Ho

0.433

0.033

1.000

0.967

0.933

1.000

0.728

He

0.731*

0.500

0.670*

0.701*

0.690*

0.605*

0.650

F

0.407

0.933

− 0.520

− 0.335

− 0.304

− 0.583

− 0.067

PIC

0.687

0.375

0.612

0.650

0.636

0.525

0.581

Cangling (CX1)

Na

2

0

6

6

5

6

4.167

Ho

0.300

0.000

0.967

1.000

1.000

1.000

0.711

He

0.500*

0.000

0.681*

0.671*

0.548*

0.563*

0.494

F

0.400

0.000

− 0.419

− 0.500

− 0.775

− 0.826

− 0.424

PIC

0.375

0.000

0.621

0.610

0.445

0.468

0.420

Luhe (CX2)

Na

0

2

2

2

3

3

2.000

Ho

0.000

0.067

1.000

1.000

1.000

1.000

0.678

He

0.000

0.500

0.500*

0.500*

0.625*

0.531*

0.443

F

0.000

0.867

− 0.879

− 0.879

− 0.560

− 0.779

− 0.446

PIC

0.000

0.875

0.875

0.875

0.805

0.859

0.715

Biyuan (NL1)

Na

4

0

6

12

8

8

6.333

Ho

0.167

0.000

0.900

1.000

1.000

1.000

0.678

He

0.722

0.000

0.697*

0.810*

0.686*

0.799*

0.619

F

0.762

0.000

− 0.254

− 0.229

− 0.413

− 0.233

− 0.073

PIC

0.671

0.000

0.643

0.786

0.639

0.773

0.585

Dongyuan (GC1)

Na

0

4

8

6

6

5

4.833

Ho

0.000

0.133

0.967

1.000

1.000

0.933

0.678

He

0.000

0.656

0.732*

0.662*

0.657*

0.706*

0.569

F

0.000

0.797

− 0.302

− 0.455

− 0.472

− 0.321

0.030

PIC

0.000

0.605

0.691

0.602

0.599

0.654

0.525

Populations

Index

Microsatellite loci

Mean

P82

P84

T4-22

T5-11

T5-13

T6-27

Yangwu (YS1)

Na

2

0

7

10

16

11

7.667

Ho

0.034

0.000

0.552

1.000

1.000

0.897

0.581

He

0.500

0.000

0.736

0.869

0.879*

0.857

0.640

F

0.931

0.000

0.281

− 0.151

− 0.142

− 0.049

0.174

PIC

0.375

0.000

0.705

0.856

0.868

0.842

0.608

Mean

Na

2.588

1.471

5.882

6.588

7.706

6.353

5.098

Ho

0.197

0.076

0.637

0.990

0.978

0.978

0.643

He

0.461

0.340

0.673

0.709

0.716

0.670

0.595

F

0.631

0.752

− 0.021

− 0.408

− 0.372

− 0.486

− 0.074

PIC

0.393

0.296

0.653

0.688

0.682

0.630

0.557

  1. HQ Heqing County; MD Midu County; XY Xiangyun County; EY Eryuan County; DL Dali City; WS Weishan County; JC Jianchuan County; CX Chuxiong City; NJ, Nanjian County; GC Gucheng County of Lijiang City; YS Yongsheng County; Na number of alleles; Ho observed heterozygosity; He expected heterozygosity; F fixation index; PIC polymorphic information content
  2. *Significant deviation from Hardy-Weinberg equilibrium