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Table 1 Target genes and rPCR primers used in this study for pathogen identification

From: Exposure to vector-borne pathogens in candidate blood donor and free-roaming dogs of northeast Italy

Target organism

Gene

Primer

Sequence (5'-3')

Pc

(μM)

TA

(°C)

Reference

Babesia/Theileria

18S rRNA

BJ1

GTCTTGTAATTGGAATGATGG

0.1

60

[31]

  

BN2

TAGTTTATGGTTAGGACTACG

0.1

  

Rickettsia spp.

rompB

RompB OFm

GTAACCGGAARTAATCGTTTCGT

0.1

58

[32]

  

RompB ORm

GCTTTATAACCAGCTAAACCRCC

0.1

  

Leishmania spp.

COII

COII F

GGCATAAATCCATGTAAGA

0.3

52

[33]

  

COII R

TGGCTTTTATATTATCATTTT

0.3

  

Ehrlichia canis

16S rRNA

CANIS

CAATTATTTATAGCCTCTGGCTATAGGA

0.5

60

[34]

  

CA1UR

GAGTTTGCCGGGACTTCTTCT

0.5

  
  1. Abbreviations: TA temperature of annealing; Pc primer concentration
  2. 16S rRNA = gene coding 16S ribosomal RNA; rompB = Rickettsial Outer Membrane Protein B gene; COII = Cytochrome c  oxidase subunit II gene ; 18S rRNA = gene coding 18S ribosomal RNA