Table 3 Summary data for complete mitochondrial genomes of species providing cytochrome b (cob), nicotinamide dehydrogenase subunit 1 (nad1) and cytochrome c oxidase subunit 1 (cox1) used in the phylogenetic analysis including Opisthorchis sp. BD2013 in ducks in Vietnam
Family/Species | Isolates/Strains | Country | GenBank ID | Reference |
|---|---|---|---|---|
Opisthorchiidae | ||||
Opisthorchis sp. BD2013 | PC6aduBD | Vietnam | MF287762–MF287764 | This study |
Opisthorchis sp. BD2013 | PM10aduBD | Vietnamb | MF287765–MF287767 | This study |
Opisthorchis sp. BD2013 | PCmetaBD | Vietnam | MF287768–MF287770 | This study |
Opisthorchis sp. BD2013 | PCcercaBD | Vietnam | MF287771–MF287773 | This study |
Opisthorchis sp. BD2013 | PCeggBD | Vietnam | MF287774–MF287776 | This study |
Opisthorchis viverrini | na | Laosb | JF739555 | [19] |
Binh Dinh 1 | Vietnamb | MF287777–MF287779 | This study | |
Khon Kaen | Thailandb | MF287780–MF287782 | This study | |
Opisthorchis felineus | Ust-Tula (Novosibirsk) | Russiab | EU921260 | [16] |
Clonorchis sinensis | Nam Dinh | Vietnamc | MF287783–MF287785 | This study |
Guangdong | Chinab | JF729303 | [19] | |
na | South Koreab | JF729304 | [19] | |
Amur - Khabarovsk | Russiab | FJ381664 | [16] | |
Metorchis orientalis | Heilongjiang | Chinab | KT239342 | [22] |
Heterophyidae | ||||
Haplorchis taichui | na | Laos | KF214770 | [24] |
Quang Tri 3 | Vietnam | MF287786–MF287788 | This study | |
Metagonimus yokogawai | na | South Korea | KC330755 | |
Fasciolidae | ||||
Fasciola hepatica | Geelong | Australia | AF216697 | [25] |
Fasciola gigantica | Guangxi | China | KF543342 | [26] |
Thua Thien-Hue | Vietnam | MF287789–MF287791 | This study | |
Fasciola sp. (intermediate form) | GHL-Heilongjiang | China | KF543343 | [26] |
Fasciolopsis buski | Jiangxi | China | KX169163 | [27] |
Ha Tay | Vietnam | MF287792–MF287794 | This study | |
Fascioloides magna | Kokořínsko | Czech Republic | KU060148 | [28] |
Schistosomatidae | ||||
Schistosoma haematobium a | N10 Village | Mali | DQ157222 | [29] |