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Table 5 Summary of sequence data generated for Finch Creek virus

From: Extended characterisation of five archival tick-borne viruses provides insights for virus discovery in Australian ticks

Segmenta

Gene

Sequence length (nt)

Protein length (aa)

% Pairwise identity with TAGV MI14850 (nt/aa)b

% Pairwise identity with TAGV Paradise Bay (nt/aa)c

% Pairwise identity with FCV (nt/aa)d

L

RdRp

11,849

3906

99.4/99.9

81.4/94.08

97.7/99.2

M

Glycoprotein

4545

1421

97.8/99.6

73.8/79.7

–

S

Nucleocapsid

1603

479

99.6/100

79.8/89.4

–

  1. aAccession numbers for FCV nucleotide sequences generated in this study L segment (OK493377), M segment (OK493378), S segment (OK493379)
  2. bTAGV, Taggert virus prototype isolate MI14850 nucleotide sequences (KU925491 to KU925493), amino acid sequences (AMR73395 to AMR73397)
  3. cTAGV, 2017 isolate from Paradise Bay, Antarctica. Nucleotide sequences (MT025170 to MT025172), amino acid sequences (QIS88061 to QIS88063)
  4. dFCV original L segment sequence [15]. Nucleotide (EU267169) and amino acid (ABX80519)
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Parasites & Vectors

ISSN: 1756-3305

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