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Table 2 Mean FST values obtained in pairwise comparisons

From: Nyssorhynchus darlingi genome-wide studies related to microgeographic dispersion and blood-seeking behavior

Dataset

Group Ia

Group IIa

NM

Geno

FST

p VALUE

IMPUT (imputed after pruning data)

C

B

123,620

188 (84.7)

0.0009

1.6 × 10-2

C

A

123,620

220(84.6)

0.0012

1.7 × 10-5

A

B

123,620

130 (84.0)

0.0015

1.3 × 10-3

Outdoor

Indoor

123,620

170 (84.5)

0.0005

9.4 × 10-2

Dusk

Dawn

123,620

107 (84.5)

0.0005

1.2 × 10-1

RAW (non-imputed data)

C

B

15,629

92 (34.5)

0.0008

3.5 × 10-3

C

A

15,629

86 (33.2)

0.0005

3.8 × 10-2

A

B

15,629

50 (32.5)

0.0027

9.8 × 10-4

Outdoor

Indoor

15,629

67(33.5)

0.0001

3.1 × 10-1

Dusk

Dawn

15,629

43(33.5)

0.0001

3.4 × 10-1

C

D

154,813

51 (14.2)

0.0420

1.0 × 10-4

  1. Bold values indicate statistically significant p values (p < 0.05)
  2. FST, Fixation index; NM, number of single nucleotide polymorphisms used; Geno, average of non-missing genotypes per marker (% of total markers)
  3. aA, B and C: Locations from Mâncio Lima, Acre at which samples were collected. D: sample location from Loreto, Peru