- Open Access
Molecular identification and prevalence of tick-borne pathogens in zebu and taurine cattle in North Cameroon
Parasites & Vectorsvolume 12, Article number: 448 (2019)
Public interest for tick-borne pathogens in cattle livestock is rising due to their veterinary and zoonotic importance. Consequently, correct identification of these potential pathogens is crucial to estimate the level of exposition, the risk and the detrimental impact on livestock and the human population.
Conventional PCR with generic primers was used to identify groups of tick-borne pathogens in cattle breeds from northern Cameroon. The overall prevalence in 1260 blood samples was 89.1%, with 993 (78.8%) positive for Theileria/Babesia spp., 959 (76.1%) for Anaplasma/Ehrlichia spp., 225 (17.9%) for Borrelia spp., and 180 (14.3%) for Rickettsia spp. Sanger sequencing of a subset of positively-tested samples revealed the presence of Theileria mutans (92.2%, 130/141), T. velifera (16.3%, 23/141), Anaplasma centrale (10.9%, 15/137), A. marginale (30.7%, 42/137), A. platys (51.1%, 70/137), Anaplasma sp. ‘Hadesa’ (10.9%, 15/137), Ehrlichia ruminantium (0.7%, 1/137), E. canis (0.7%, 1/137), Borrelia theileri (91.3%, 42/46), Rickettsia africae (59.4%, 19/32) and R. felis (12.5%, 4/32). A high level of both intra- and inter-generic co-infections (76.0%) was observed. To the best of our knowledge, B. theileri, T. mutans, T. velifera, A. platys, Anaplasma sp. ‘Hadesa’, R. felis and E. canis are reported for the first time in cattle from Cameroon, and for R. felis it is the first discovery in the cattle host. Babesia spp. were not detected by sequencing. The highest number of still identifiable species co-infections was up to four pathogens per genus group. Multifactorial analyses revealed a significant association of infection with Borrelia theileri and anemia. Whereas animals of older age had a higher risk of infection, the Gudali cattle had a lower risk compared to the other local breeds.
Co-infections of tick-borne pathogens with an overall high prevalence were found in all five study sites, and were more likely to occur than single infections. Fulani, Namchi and Kapsiki were the most infected breed in general; however, with regions as significant risk factor. A better-adapted approach for tick-borne pathogen identification in co-infected samples is a requirement for epidemiological investigations and tailored control measures.
Tick-borne pathogens (TBPs) have severely impaired livestock productivity worldwide, with an increasing risk for the human population due to their potential zoonotic character . In tropical Africa, ticks are vectors for a large variety of diseases, such as piroplasmoses caused by the protozoans Babesia and Theileria, bacterial infections with species of the genera Anaplasma (anaplasmosis), Borrelia (relapsing fever), Ehrlichia (heartwater), Rickettsia (spotted fever), and also many viral diseases, like Crimean-Congo hemorrhagic fever . These infectious diseases cause considerable losses and diminish the economic value of livestock where the enzootic status remains unstable .
In Cameroon, which is one of the main regional providers of beef and other products derived from cattle, the population is dominated by zebu and crossbreeds (European taurine × zebu and African taurine × zebu), with the taurine cattle population at risk of extinction due to widespread and uncontrolled admixture . The main local vectors for TBPs are hard ticks of the genera Amblyomma, Haemaphysalis, Hyalomma and Rhipicephalus . Pure Bos taurus indicus cattle have been reported less susceptible to TBPs than pure Bos taurus taurus cattle, based on attractiveness for the respective tick vectors and/or due to more effective immunological responses .
The prevalence of the various TBPs and their interdependences in Cameroon are not well investigated. Most of the studies used conventional microscopy of blood-smears, serology, or post-mortem analyses [6, 7] which all have considerable limitations. Identification of individual species of pathogens is almost impossible without the intervention of molecular tools, like PCR. Moreover, studies on the prevalence of the locally available TBPs in Cameroon and in particular on the level of co-infection is scarce. The present study aims to investigate the occurrence of TBPs in the cattle population, including “mild” and “non-pathogenic” conspecifics and their level of co-infection. Furthermore, the level of exposition and infection of different cattle breeds in Cameroon to TBPs, and the potential risk of exposure for the human population is highlighted.
Study sites and location
The sampling took place from April 2014 (end of the dry season) to June 2015 (middle of the rainy season). A total of 1260 cattle were examined in three different bioclimatic zones in the northern part of Cameroon. The corresponding sites (Fig. 1) were the Adamaoua highlands with 64,000 km2 of surface, representing the sub-humid Guinea savannah biotope, the North with 67,000 km2, representing the semi-arid Sudan savannah, and the Far North with 34,000 km2, representing the arid Sahel region. Sampling time was generally in the morning and mostly during the rainy season (April until October). Five sites were visited in the three regions: Vina (n = 396 cattle examined) and Faro et Deo (n =198) in the Adamaoua; Faro (n = 175) and Mayo-Rey (n = 310) in the North; and Mayo Tsanaga (n = 181) in the Far North.
Field work, sampling procedure and DNA isolation
For each herd visited, approximately 10% of the cattle were sampled. Parameters of age in years, sex, breed [Gudali; White and Red Fulani grouped as Fulani; Bokolodji (= Zebu Bos taurus indicus); Namchi/Doyao; Kapsiki (= autochtonous Bos taurus taurus); Charolais (= European Bos taurus taurus and cross-breed)], weight and body condition score (BCS) were taken from each animal. The BCS varied from 1 to 5 according to the fat and muscle appearance: 1–2, poor; 3–4, good; and 5, very good (convex look or blocky). The weight was standardized as recommended by Tebug et al.  using the formula LW = 4.81 HG–437.52 (where LW is live weight and HG is thoracic girth measurement in cm). The age was assessed by the dentition  and by the information of the herd keeper. Sampled animals were grouped as weaners (1–2.5 years-old), adults (2.5–4.5 years-old), old (4.5–8 years-old) and very old (> 8 years-old).
Approximately 5 ml of blood per animal was collected from the jugular vein in 9 ml ethylene diamine tetra acetic acid (EDTA) treated vacutainer tubes (Greiner Bio-One, Frickenhausen, Germany) and analyzed for packed cell volume (PCV) . Briefly, approximatively 70 µl of collected whole blood was transferred into heparinized micro-hematocrit capillaries and centrifuged for 5 min at 12,000× rpm in a hematocrit centrifuge (Hawksley & Sons Limited, Lancing, UK). The solid cellular phase in relation to the liquid serum phase was measured using the Hawksley micro hematocrit reader (MRS Scientific, Wickford, UK). A PCV below the threshold level of 26% was considered anemic. The remaining whole blood was centrifuged at 3000× rpm for 15 min. Plasma was collected for immunological studies (not applicable here) and the remaining fraction (red blood cells and buffy coat) was used for DNA isolation.
Samples of 300 µl of the erythrocyte and cellular fraction were purified using the Wizard® Genomic DNA Purification Kit (Promega, Madison, USA) according to the manufacturer’s instruction. For sample preservation, 50 µl of trehalose enriched 0.1× Tris EDTA (TE) solution (c = 0.2 M, Sigma-Aldrich, Taufkirchen, Munich, Germany) was added as DNA stabilizing preservative in the tube containing the extracted DNA , vortexed and spun down. All samples were stored at room temperature in a dry and light-protected environment after being left to dry at 37 °C. Rehydration was done in the laboratory in Tübingen using 75 µl 0.1× TE buffer at 35 °C for at least 10 min until the pellet was completely resolved, and immediately stored at − 20 °C.
Polymerase chain reaction for tick-borne pathogens
In 25 µl sample reaction tubes, 12.5 µl of the 2× RedMaster Mix (Genaxxon Bioscience, Ulm, Germany) were mixed with the corresponding primer pairs to the final concentration of 1 pmol/µl. One microliter of template DNA and molecular grade water (Sigma-Aldrich) were added to complete the volume at 25 µl. As a negative control, molecular-grade water (Sigma-Aldrich) was used, and positive controls were kindly shared by colleagues from the Freie Universität Berlin, Germany. For the detection of Borrelia spp., 1 µl of the first PCR reaction was used as a template for the second amplification in a nested PCR. The corresponding gene loci, primer pairs and annealing temperatures are shown in Table 1.
The PCR cycling conditions were: initial denaturation at 95 °C for 3 min, denaturation at 95 °C for 30 s and elongation at 72 °C for 30 s repeated 35 times, and final elongation at 72 °C for 10 min (MasterCycler EP S Thermal Cycler®, Eppendorf, Hamburg, Germany). All samples were visualized through electrophoresis on a 1.5% agarose gel stained with Midori Green (Nippon Genetics Europe, Düren, Germany). Selected positive reactions were prepared following manufacturer’s recommendations (Macrogen, Amsterdam, Netherlands) and sent for sequencing. Obtained sequences were compared to the non-redundant database GenBank (NCBI) using BLASTN (http://blast.ncbi.nlm.nih.gov/) in the Geneious 9.1 software (Biomatters, Auckland, New Zealand).
Annotated sequences of the same genus and locus were extracted from the GenBank database, and aligned with the MUSCLE algorithm using standard parameters. Maximum Likelihood trees based on the Tamura-Nei model with 1000 bootstrap replications were generated using the software MEGA6 . Initial trees for the heuristic search were obtained by applying the Neighbor-Joining method to a matrix of pairwise distances estimated using the Maximum Composite Likelihood approach. Furthermore, a discrete Gamma distribution was used to model evolutionary rate differences among sites. The rate variation model allowed some sites to be evolutionary invariable. Babesia bigemina was selected as the outgroup for the Theileria tree, whereas Wolbachia pipientis was the outgroup for both Anaplasma/Ehrlichia and Rickettsia trees.
Descriptive statistics were performed to summarize TBP frequency, percentage, and proportion in study sites and co-infection levels according to region and breed. Multivariate logistic regression (MLG) analysis and descriptive statistics were performed using R v.3.4.2 (www.R-project.org) with the ISLR package for the MLG. The association between pathogen acquisition and independent variables were examined by computing the odds ratios (OR), 95% confidence intervals (CI) and P-value and using the logit equation in the logistic regression model. Each TBP species was used independently as outcome in separate equations. The other variables (PCV, BCS, age, sex, region and breed) were used as baseline predictors. All cattle breeds with less than 10 sampled individuals and all TBP species with less than 10 infected animals were excluded from the logistic regression. A P-value below 0.05 was considered statistically significant.
Cattle breeds examined and sampling sites
A total of 1306 cattle were examined in the three administrative regions of North Cameroon (Adamaoua, North, Far North) of which 1260 blood samples were used for molecular analyses. The different categories sex, age group, breed, region, BCS and PCV, together with the population prevalence of TBPs are summarized in Table 2. Data from seven different groups of cattle breed were gathered, including four zebu breeds Gudali (n = 687), White/Red Fulani grouped as Fulani (n = 116) and Bokolodji (n = 6), two indigenous taurine breeds Namchi/Doyao (n = 181) and Kapsiki (n = 200), cross-breeds (n = 37), and Charolais (n = 27). Most examined animals were female (76.9%). The age ranged from 1 to 16 years and the PCV from 11 to 55%.
Prevalence of TBPs by PCR
The blood samples of all 1260 animals were analyzed for TBP detection by conventional PCR with group-specific primer pairs for Babesia/Theileria spp., Anaplasma/Ehrlichia spp., Borrelia spp. and Rickettsia spp. The number of PCR-positive cases was 993 (78.8%) for Babesia/Theileria spp., 959 (76.1%) for Anaplasma/Ehrlichia spp., 225 (17.9%) for Borrelia spp., and 180 (14.3%) for Rickettsia spp. (Table 2). Nine hundred and three (80.4%, 903/1123) of all infected cattle were found to carry at least two of the screened pathogen groups, and the overall TBP prevalence was 89.1% (1123/1260) with every individual carrying at least one of the groups described above. The Adamaoua region had an overall prevalence of 87.9% (522/594) for all pathogens combined.
Logistic regression of pathogen acquisition with independent variables
Each of the identified pathogens (n = 7) was used as outcome in a logistic regression analysis. The results are reported in Table 3. Logistic regression analyzing the association of all TBPs as outcome to environmental and health factors highlighted the Kapsiki breed and older age as main risk factors (OR: 1.96, CI: 0.8–0.97, P = 0.01 and OR: 8.8, CI: 2.0–6.2, P = 0.002, respectively).
Pathogen identification and co-infections
For species identification, 296 of the 1123 PCR positive samples (26.4%) were selected for DNA sequencing, of which 240 (81.0%) could be successfully sequenced. Of these, 78.0% were generated for Anaplasma/Ehrlichia spp. (146/187), 84.4% for Babesia/Theileria spp. (141/167), 91.3% for Borrelia spp. (42/46), and 53.9% for Rickettsia spp. (34/63; Table 2). In total, 12 different species or genotypes were identified by matching with the GenBank database. Ranked after the most prevalent species, these were: T. mutans, A. platys, A. marginale, B. theileri, A. centrale, Anaplasma sp. ‘Hadesa’, T. velifera, R. africae, R. felis, Theileria sp. B15a, E. ruminantium and E. canis. The phylogenetic ML tree compares those genotypes with database entries from GenBank (Fig. 2a–c).
Co-infections with species of the same genus or group of genera were common. The highest percentage of animals with more than three of the five genera of parasites per individual was found in the Far North region (6.1%), followed by Adamaoua (2.8%) and North region (0.8%). The age was significantly associated to the pathogen acquisition (P = 0.002) with older animals being more infected. Kapsiki from the Mayo-Tsanaga division were more infected with TBPs (99.4% per region) than Namchi and zebu breeds from other regions (P = 0.01).
Single infections were detected in 264 (24.0%) of the 1123 infected cases. Intra-generic double infections that could still be delimitated to the respective species (Table 4), were most frequent for T. mutans + T. velifera (60.0%), followed by A. platys + A. marginale (17.3%), and A. platys + Anaplasma sp. ‘Hadesa’ (9.6%). In 45 cases (52%) of intra-generic co-infections, only one species could be identified. The most common inter-generic combinations were of T. mutans + A. platys, T. mutans + Anaplasma sp. ‘Hadesa’, T. mutans + R. africae and T. mutans + A. marginale. Gudali breed had less co-infections than Namchi and Kapsiki breeds.
Prevalence of Anaplasma/Ehrlichia species
PCR-positive samples from the Anaplasma/Ehrlichia group were found mostly in the Vina site on the Adamaoua Plateau (Table 4). Among the 146 positive sequences, 62.0% represented single infections and 38.0% represented co-infections. Single infections of E. canis and E. ruminantium were found in the sites Mayo Rey and Faro et Deo, respectively (Table 4). According to the proportions of the identified Anaplasma/Ehrlichia spp. in all study sites the total prevalence was 36.5% for A. platys, 21.9% for A. marginale, 7.8% for A. centrale, 7.8% for Anaplasma sp. ‘Hadesa’, 0.5% for E. ruminantium, and 0.5% for E. canis. Infection with Anaplasma spp. increases the likelihood of Theileria spp. infection and vice versa (Table 3). The age appeared being a risk factor for the acquisition of A. platys, with older animals being more infected (OR: 0.8, CI: 0.7–0.9, P = 0.02, Table 3).
Prevalence of Borrelia species
Borrelia pathogens were identified in all studied regions with the Adamaoua having significantly higher prevalence (OR: 3.5, CI: 2.0–6.2, P < 0.0001). The only identified species by sequencing was B. theileri with an overall prevalence of 17.9%. Gudali breeds were the least infected cattle with statistical support (P = 0.02). Younger animals were significantly less infected (OR: 0.8, CI: 0.7–0.9, P = 0.003). Borrelia theileri infection was significantly associated to anemia (OR: 2.9, CI: 1.8–4.6, P < 0.0001).
Prevalence of Rickettsia species
Rickettsia spp. were found in all the regions with no statistical difference. Cattle breed and age was not significantly associated to corresponding infected and non-infected groups. At least one individual from all examined breeds was positive for Rickettsia spp., except for Bokolodji (n = 6) which was excluded from the logistic regression analysis. The two species identified by sequencing were R. africae (prevalence 2.8%) and R. felis (prevalence 0.6%). For R. africae, the presence of T. mutans was a contributing risk factor (OR: 8.4, CI: 2.6–26.9, P = 0.0002).
Prevalence of Theileria species
Theileria mutans and T. velifera were detected in all screened regions. Furthermore, a closely related sequence of T. mutans, Theileria sp. B15a (GenBank: MN120896) has been detected (Fig. 2c). The overall prevalence of Theileria spp. was 57.3% for T. mutans, 2.7% for T. velifera, 0.5% for Theileria sp. B15a and 18.4% for Theileria spp. identified only to the genus level. Theileria mutans was highly associated with a number of TBP co-infections, including A. centrale, A. marginale, A. platys, Anaplasma sp. ‘Hadesa’, R. africae and T. velifera (Table 3). Furthermore, the taurine breeds, Namchi and Kapsiki were risk factors for T. velifera infection (OR: 9.0, CI: 1.4–64.4, P = 0.02) and (OR: 7.4, CI: 1.5–42.3, P = 0.01) respectively, as well as for co-infections with A. centrale and Anaplasma sp. ‘Hadesa’ (Table 3).
Phylogenetic analysis and genetic distances
Maximum Likelihood trees for the genera Theileria, Rickettsia and Anaplasma/Ehrlichia show the evolutionary relationships of the newly acquired sequences in comparison to published GenBank entries (Fig. 2a–c). Most matched very well with published sequences, but also a new genotype in the clade A. platys/Anaplasma sp. ‘Omatjenne’ (GenBank: MN120891), and another unrecorded genotype closely related to Anaplasma sp. ‘Hadesa’ (GenBank: MN124079), were found.
Conventional PCR was used to assess the prevalence of circulating tick-borne parasites and bacteria in cattle from Cameroon’s most important rearing sites in the northern regions. Four different primer pairs targeting ribosomal RNA loci allowed the identification of six genera of important species of TBPs. To the best of our knowledge, our study provides first molecular proof for the presence of Borrelia theileri, Ehrlichia canis, Theileria mutans, Theileria velifera, Anaplasma sp. ‘Hadesa’, Anaplasma platys and Rickettsia felis in cattle from Cameroon.
Generally, we found a high TBP prevalence, including a high level of co-infection with other TBP species. Many of the identified TBPs in those cattle are of major economic importance in Africa , while some are also causing zoonotic infections in humans. The investigated TBPs differed significantly depending on the cattle breed, age and geographical region, where indigenous taurine breeds, older age and the cattle-rich Adamaoua region were the highest risk factors, respectively. Although the detection and identification of co-infections by using generic primers without cloning can be at times challenging, a sample set of the presently identified species was confirmed by a reverse line blot DNA microarray, albeit with a lower detection rate than the microarray .
Anaplasma marginale and A. centrale are gram-negative bacteria of the order Rickettsiales, and known to cause bovine anaplasmosis in tropical and subtropical regions . The prevalence in the present study (A. marginale: 21.9%, A. centrale: 7.8%) was significantly lower than reported in a recent study from North Cameroon with 62.2% and 53.3%, respectively , using Giemsa staining. Conversely, our results were higher than reported in the North-West region where the prevalence was 2.2% for A. marginale and 0% for A. centrale, respectively . The limited mobility of cattle from the ‘Centre de Recherche Zootechnique’ ranch in the North-West region and possibly better husbandry management  may explain the lower prevalence and TBP diversity in this area. Moreover, transhumance regularly undertaken by cattle holder in the Adamaoua region could explain the diversity of identified Anaplasma species, and the observed prevalence variability . Different study results from the same sampling area in the Vina division are best explained by the alternative technical approaches used for identification. In comparison to molecular tools, microscopic analyses of blood smears are used for rapid diagnostic and informative purposes on the animals’ health status. In fact, identification by microscopy is prone to errors in species identification, as pathogens may look very similar among and between genera leading to misidentification, or may be missed depending on the animals’ patency or developmental status . Anaplasma marginale and A. centrale are known to be mainly transmitted by ticks of the genus Rhipicephalus, in addition to other genera having also been reported as vectors . In Cameroon, R. appendiculatus has been identified in the sampling regions as the second most common tick , correlating with the high prevalence of these pathogens in the corresponding sites. In our study, sex was significantly associated with the acquisition of A. marginale, although with a low odds ratio (OR: 0.3, CI: 0.1–0.9, P = 0.03, Table 3).
Anaplasma sp. ‘Hadesa’ identified in our sample set had been previously identified in blood samples from Ethiopian zebu cattle . The phylogenetic tree grouped our sequence (GenBank: MN124079) to its clade in a relatively high evolutionary distance from other Anaplasma and Ehrlichia species (Fig. 2a). In our dataset Anaplasma sp. ‘Hadesa’ was inversely correlated with the Adamaoua region, significantly but with low support (OR: 1.0, CI: 0.007–0.7, P = 0.04).
Anaplasma platys is known as a canine pathogen, causing cyclic thrombocytopenia in dogs. However, it has also been identified in other mammals including cattle, humans and ticks worldwide . In the present study, it was the most commonly detected Anaplasma species (prevalence of 36.5%). Two groups of genotypes were found, one of which had yet no listed entry in GenBank (GenBank: MN120882). The absence of detection of this pathogen in previous studies from Cameroon is very likely due to its misidentification for other TBPs . Furthermore, the clade A. platys matched very well with Anaplasma sp. ‘Omatjenne’ (> 99% identity, GenBank: U54806, Fig. 2a), which was first isolated in sheep and Hyalomma truncatum ticks from South Africa  and later often diagnosed by its corresponding DNA probes used for reverse line blots assay . In the study by Allsop et al. , the complete genome of Anaplasma sp. ‘Omatjenne’ (GenBank: U54806) shared 99.9% identity with Anaplasma (Ehrlichia) platys and closely resembled the genome of E. canis, most likely due to wrong species annotation . Rhipicephalus sanguineus (sensu lato) is thought to be the most likely vector of the pathogen which is a tick species already identified in Cameroon . Anaplasma platys was identified in 70 specimens of the sequenced subset resulting in a relatively high prevalence (36.5%) in comparison to the records in cattle from Algeria (4.8%) , Italy (3.5%)  and Tunisia (22.8%) . As a rule, rather than exception, A. platys was found in co-infection with other TBPs of the genus Theileria with the infection rate increasing with age (Table 3).
Ehrlichia canis is a gram-negative bacterium causing canine monocytic ehrlichiosis in dogs and wild canids; these mammals can serve as a natural reservoir for human infections with R. sanguineus ticks as a natural vector in tropical and subtropical areas . Ehrlichia canis has also been identified in other Rhipicephalus species . Among others, the pathogen has been found in dogs from Cameroon , Nigeria, South Africa, Portugal, Venezuela . To our knowledge, the present study provides the first evidence for the ocurrence of E. canis in cattle from Cameroon. Only one sample from our sequenced subset (n = 187) was identified to be E. canis. The infected host was a 2-year-old Gudali female cow from the North region in the Mayo Rey site. In fact, cattle paddocks include space for dogs, chicken and other domestic animals living in close proximity. As for most of the TBPs clinically healthy dogs in the subclinical stage can be carriers of E. canis for years , facilitating the infection of other susceptible hosts. According to the PCV and the BCS, the animal infected by E. canis was not suffering from illness albeit co-infected with T. mutans. In our study the E. canis strain shared 99.6% identity with the E. canis amplicon described in Italy and published under the GenBank accession numbers KY559099 and KY559100  (Fig. 2a).
Ehrlichia (Cowdria) ruminantium is the etiological agent of heartwater, also called cowdriosis, in domestic ruminants. The evidence of E. ruminantium in Cameroon has been clearly demonstrated in cattle carcasses  and the tick vector Amblyomma variegatum . Only one positive case of E. ruminantium could be identified from our samples subset, representing the second molecular evidence of this pathogen in cattle from Cameroon . The prevalence in our data (0.5%), was significantly lower in comparison to the recently published data (6.6%) on cattle blood from the North and Southwest region of Cameroon . The infected animal was a two years old Red Fulani breed from the Faro et Deo division on the Adamaoua plateau. The BCS was within the range characteristic for an asymptomatic animal, and the PCV level (23 %) indicated anemia. The pathogen was found in co-infections with A. centrale, T. mutans, B. theileri and an unidentified Rickettsia sp. The identified strain (GenBank: MN120892) had > 99% sequence identity with the strain ‘Welgevonden’ as previously described from Cameroonian samples .
Theileria mutans and T. velifera are known as mild to non-pathogenic species in cattle. Amblyomma variegatum ticks transmit T. mutans, with the vector being endemic in the northern part of Cameroon. Although age has been reported as a risk factor, our study did not show significant associations (OR: 0.1, CI: 0.9–1.7, P = 0.2). Theileria mutans is known as non-schizont-transforming of the Theileria spp. benign group . However, studies have shown that the presence of the piroplasm at high density in red blood cells can cause disease associated to anemia . The present study did not find any significant difference regarding the PCV level (OR: 0.4, CI: 0.1–1.0, P = 0.08). The genotype Theileria sp. B15a (GenBank: MN120896) detected, formerly isolated from African buffaloes in South Africa, grouped within the T. mutans clade (Fig. 2c) indicating it belongs to the same species.
No schizonts have been described for T. velifera , whose natural host is the African buffalo, found in high numbers in the Waza National park in the Far North region of Cameroon. This may be the reason for the higher T. velifera prevalence in the Kapsiki breed, which are the only cattle kept in this area. No highly pathogenic Theileria spp. such as T. parva and T. annulata was detected in the examined animals. This result indicates either its absence in Cameroon, or the presence below detection levels in cattle formerly or presently infected with T. mutans and/or T. velifera.
Borrelia theileri is a member of the tick-borne relapsing fever group in contrast to the Lyme borreliosis group . The present study reports for the first time the presence of B. theileri in blood samples from cattle in Cameroon. The spirochete bacterium is known to be transmitted to cattle by hard ticks of the genus Rhipicephalus, e.g. R. microplus, R. annulatus and R. decoloratus . The pathogen has also been found in R. geigyi, however, its capacity as a vector is unknown . Reported cases of tick-borne relapsing fever have been proven responsible for economic losses in livestock . In cattle, B. theileri infections have been associated with fever and anemia . In our study area, 17.9% of the studied cattle population was positive for Borrelia spp., with B. theileri being the only species identified by sequencing.
Furthermore, B. theileri was significantly associated with anemia (OR: 2.9, CI: 1.8–4.6, P < 0.0001), and present in co-infections with other TBPs in 62% of cases. The highest degree of co-infection comprised T. velifera, T. mutans, R. felis, A. platys and A. centrale. Similar TBP co-infections excluding Rickettsia spp. have been reported [42, 43]. Taurine cattle were significantly more infected than zebu cattle (P < 0.01) in line with previously published studies , and the difference was significant among age groups with old animals being more infected than their younger counterparts (Table 3). The genotype of B. theileri identified in our study (GenBank: MN120889) was 99.9% identical to the strain found in Rhipicephalus geigyi from Mali.
Spotted fever Rickettsia group
Rickettsia africae is known as the causative agent of African tick bite fever, and has been identified in Cameroon by PCR at a prevalence of 6% from human patients with acute febrile illness without malaria or typhoid fever , and at a prevalence of 51% in man from cattle-rearing areas . In previous studies, the pathogen has been identified molecularly in 75% of A. variegatum ticks collected from cattle in southern Cameroon . A recent study on ticks collected from cattle in the municipal slaughterhouse of Ngaoundéré in the Adamaoua region in northern Cameroon revealed the presence of R. africae among other Rickettsia species not identified in our survey . However, the ML tree (Fig. 2b) illustrates the difficulty to clearly distinguish closely related Rickettsia spp. when using the 16S rRNA marker . The genotype of R. africae identified in our study (GenBank: MN124096) was 99.7% identical to the strain found in Hyalomma dromedari in Egypt and A. variegatum in Benin and Nigeria .
Rickettsia felis is known as an emerging insect-borne rickettsial pathogen and the causative agent of flea-borne spotted fever . Four out of 34 sequenced Rickettsia spp. (11.8%) with a prevalence of 0.6% in the sequenced cattle population were detected. The infected animals were from the North region, more precisely from the Faro, Mayo Rey and Mayo-Tsanaga sites, and were in 75% of cases in autochthonous B. taurus breeds. The present study reports for the first time R. felis in cattle hosts, with previous identification from fecal samples in chimpanzees, gorillas and bonobo apes from Central Africa, including the southern part of Cameroon at a prevalence of 22% . Furthermore, R. felis has been identified in Anopheles gambiae mosquitoes , and human cases were common in Kenya  and Senegal . The strain reported in this study (GenBank: MN124093) matches at 99.7% identity with the one described in a booklouse from England as rickettsial endosymbiont (GenBank: DQ652592) and in a cat flea from Mexico  indicating they are not predominantly transmitted by ticks, even though they have been found before in tick vectors.
In North Cameroon, we identified by sequencing of PCR-amplified rDNA from bovine blood at least 11 species of tick-borne pathogens, some of which are known to be pathogenic to livestock or humans alike. Anaplasma platys, Borrelia theileri, Ehrlichia canis, Rickettsia felis, Theileria mutans and Theileria velifera were identified for the first time in cattle from Cameroon. Furthermore, genuinely new genotype sequences related to A. platys and Anaplasma sp. ‘Hadesa’ were discovered. The high pathogen diversity and levels of co-infection in the livestock population is possibly a result from interaction between different host animals (transhumance or contacts between other domestic and wild animals) and their corresponding tick vectors. In addition to the identification of novel TBP species and genotypes, this study shows the necessity of a universally applicable method for TBP identification unbiased by co-infestations with other related pathogens, which appear in more than 75% of the infected cases.
Availability of data and materials
The sequences generated during the present study are available in the NCBI GenBank repository under the accession numbers MN120882, MN120888–MN120892, MN120895–MN120896, MN124079, MN124093–MN124096.
polymerase chain reaction
packed cell volume
ethylene diamine tetra acetic acid
National Center for Biotechnology Information
Basic Local Alignment Search Tool
body condition score
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We dedicate this publication to the lately deceased Dr Almeck K. Aboubakar Dandjouma, former Chief of Center of the National Institute of Agricultural Research for Development in Ngaoundéré, who always provided essential equipment and workforce to ensure the safety and progress during the fieldwork. We thank Zerihun Hailemariam, Erich Zweygarth and Ard Nijhof from the Freie Universität Berlin, for their advice and for providing positive controls for the study; Fernanda Ruiz-Fadel for proofreading the manuscript; and Anaba Banimb Robert Christian from the Department of Geography at the University of Ngaoundéré, for the realization of the map used in the publication. We also thank Monsieur Boubakari for his time and willingness to help besides his working hours. A special thank you goes to Dr Mbunkah Daniel Achukwi from the Trypanosomosis Onchocerciasis Zoonoses Association for Research & Development in Bamenda, and the students from the School of Veterinary Medicine and Sciences of the University of Ngaoundéré who helped with the fieldwork. The workforce from the National Institute of Agricultural Research for Development IRAD in Ngaoundéré, Madame Maimounatou, and the staff of the Programme Onchocercoses field station in Ngaoundéré for their assistance during the analysis in the laboratory (David Ekale, Jeremie Yembo and Kalip Mbayambe).
Data collection for this study was financed by the Otto Bayer Foundation (Grant no. F-2013BS522). The German Research Foundation (DFG, no. RE 1536/2-1) and the joint RiSC Programme of the State Ministry of Science, Research and Arts Baden Württemberg and the University of Tübingen (PSP-no. 4041002616) funded the molecular and bioinformatic analysis. We acknowledge support on publication charges by Deutsche Forschungsgemeinschaft and Open Access Publishing Fund of University of Tübingen. The Sandwich Programme of the German Academic Exchange Service (DAAD, grant no. BA_A/12/ 97080) and the Baden Württemberg Foundation was funding the research stay of BA.
Ethics approval and consent to participate
The study has been carried out with the consent of the regional state representatives and traditional authorities from each of the sampling areas. Furthermore, oral consent was given by the cattle owners, herdsmen (who also helped in restraining the animals), and with the participation and approval of the National Institute of Agricultural Research for Development (IRAD) in Cameroon, which is the country’s government institution for animal health and livestock husbandry improvement.
Consent for publication
The authors declare that they have no competing interests.
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